Kluger, Yuval: search on Z-Library

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1

Mahalanobis distance informed by clustering

Lahav, Almog, Talmon, Ronen, Kluger, Yuval

Journal:

Information and Inference

Year:

2018

Language:

english

File:

PDF, 4.57 MB

english, 2018

2

Algorithm 971

Li, Huamin, Linderman, George C., Szlam, Arthur, Stanton, Kelly P., Kluger, Yuval, Tygert, Mark

Journal:

ACM Transactions on Mathematical Software

Year:

2017

Language:

english

File:

PDF, 510 KB

english, 2017

3

DeepSurv: personalized treatment recommender system using a Cox proportional hazards deep neural network

Katzman, Jared L., Shaham, Uri, Cloninger, Alexander, Bates, Jonathan, Jiang, Tingting, Kluger, Yuval

Journal:

BMC Medical Research Methodology

Year:

2018

Language:

english

File:

PDF, 2.48 MB

english, 2018

4

Single-Cell Analysis Reveals a Hair Follicle Dermal Niche Molecular Differentiation Trajectory that Begins Prior to Morphogenesis

Gupta, Khusali, Levinsohn, Jonathan, Linderman, George, Chen, Demeng, Sun, Thomas Yang, Dong, Danni, Taketo, M. Mark, Bosenberg, Marcus, Kluger, Yuval, Choate, Keith, Myung, Peggy

Journal:

Developmental Cell

Year:

2019

Language:

english

File:

PDF, 5.86 MB

english, 2019

5

Impact of healthcare worker shift scheduling on workforce preservation during the COVID-19 pandemic

Kluger, Dan M., Aizenbud, Yariv, Jaffe, Ariel, Parisi, Fabio, Aizenbud, Lilach, Minsky-Fenick, Eyal, Kluger, Jonathan M., Farhadian, Shelli, Kluger, Harriet M., Kluger, Yuval

Journal:

Infection Control and Hospital Epidemiology

Year:

2020

File:

PDF, 942 KB

2020

6

Randomized algorithms for distributed computation of principal component analysis and singular value decomposition

Li, Huamin, Kluger, Yuval, Tygert, Mark

Journal:

Advances in Computational Mathematics

Year:

2018

Language:

english

File:

PDF, 544 KB

english, 2018

7

Fast interpolation-based t-SNE for improved visualization of single-cell RNA-seq data

Linderman, George C., Rachh, Manas, Hoskins, Jeremy G., Steinerberger, Stefan, Kluger, Yuval

Journal:

Year:

2019

Language:

english

File:

PDF, 3.22 MB

english, 2019

8

Anomalous transverse distribution of pions as a signal for the production of disoriented chiral condensates

Cooper, Fred, Kluger, Yuval, Mottola, Emil

Journal:

Physical Review C

Year:

1996

Language:

english

File:

PDF, 134 KB

english, 1996

9

A tissue quality index: an intrinsic control for measurement of effects of preanalytical variables on FFPE tissue

Neumeister, Veronique M, Parisi, Fabio, England, Allison M, Siddiqui, Summar, Anagnostou, Valsamo, Zarrella, Elizabeth, Vassilakopolou, Maria, Bai, Yalai, Saylor, Sasha, Sapino, Anna, Kluger, Yuval, H

Journal:

Laboratory Investigation

Year:

2014

Language:

english

File:

PDF, 245 KB

english, 2014

10

Removal of Batch Effects using Distribution-Matching Residual Networks

Shaham, Uri, Stanton, Kelly P., Zhao, Jun, Li, Huamin, Raddassi, Khadir, Montgomery, Ruth, Kluger, Yuval

Journal:

Year:

2017

Language:

english

File:

PDF, 590 KB

english, 2017

11

Author Correction: Distinct modes of mitochondrial metabolism uncouple T cell differentiation and function

Bailis, Will, Shyer, Justin A., Zhao, Jun, Canaveras, Juan Carlos Garcia, Al Khazal, Fatimah J., Qu, Rihao, Steach, Holly R., Bielecki, Piotr, Khan, Omair, Jackson, Ruaidhri, Kluger, Yuval, Maher, Lou

Journal:

Year:

2019

File:

PDF, 640 KB

2019

12

Genome-wide remodeling of the epigenetic landscape during myogenic differentiation

Patrik Asp, Roy Blum, Vasupradha Vethantham, Fabio Parisi, Mariann Micsinai, Jemmie Cheng, Christopher Bowman, Yuval Kluger and Brian David Dynlacht

Journal:

Proceedings of the National Academy of Sciences

Year:

2011

Language:

english

File:

PDF, 517 KB

english, 2011

13

Identification of multi-loci hubs from 4C-seq demonstrates the functional importance of simultaneous interactions

Jiang, Tingting, Raviram, Ramya, Snetkova, Valentina, Rocha, Pedro P., Proudhon, Charlotte, Badri, Sana, Bonneau, Richard, Skok, Jane A., Kluger, Yuval

Journal:

Nucleic Acids Research

Year:

2016

Language:

english

File:

PDF, 2.96 MB

english, 2016

14

19. PLEKHA5 REGULATES TUMOR GROWTH IN METASTATIC MELANOMA

Oria, Victor, Zhang, Hongyi, Zhu, Huifang, Deng, Gang, Zito, Christopher, Rane, Chetan, Zhang, Shenqi, Weiss, Sarah, Tran, Thuy, Adeniran, Adebowale, Zhang, Fanfan, Zhou, Jiangbing, Kluger, Yuval, Bos

Journal:

Neuro-Oncology Advances

Year:

2020

File:

PDF, 86 KB

2020

15

Cyclin-Dependent Kinase 1 Activity Is a Driver of Cyst Growth in Polycystic Kidney Disease

Zhang, Chao, Balbo, Bruno, Ma, Ming, Zhao, Jun, Tian, Xin, Kluger, Yuval, Somlo, Stefan

Journal:

Journal of the American Society of Nephrology

Year:

2020

File:

PDF, 1.64 MB

2020

16

OR.65. Melanoma Biomarker Discovery Through Serum Antibody Profiling On Protein Microarrays

Dawn Mattoon, Brad Love, Yuval Kluger, Greg Michaud, Barry Schweitzer, Paul Predki, Gerd Ritter, Ruth Halaban

Journal:

Clinical Immunology

Year:

2006

Language:

english

File:

PDF, 37 KB

english, 2006

17

Relationship between gene co-expression and probe localization on microarray slides

Yuval Kluger, Haiyuan Yu, Jiang Qian, Mark Gerstein

Journal:

Year:

2003

Language:

english

File:

PDF, 388 KB

english, 2003

18

Nonequilibrium quantum fields in the large- N expansion

Cooper, Fred, Habib, Salman, Kluger, Yuval, Mottola, Emil, Paz, Juan Pablo, Anderson, Paul R.

Journal:

Physical Review D

Year:

1994

Language:

english

File:

PDF, 717 KB

english, 1994

19

Single cell transcriptomics reveals unanticipated features of early hematopoietic precursors

Yang, Jennifer, Tanaka, Yoshiaki, Seay, Montrell, Li, Zhen, Jin, Jiaqi, Garmire, Lana Xia, Zhu, Xun, Taylor, Ashley, Li, Weidong, Euskirchen, Ghia, Halene, Stephanie, Kluger, Yuval, Snyder, Michael P.

Journal:

Nucleic Acids Research

Year:

2016

Language:

english

File:

PDF, 3.35 MB

english, 2016

20

Fast interpolation-based t-SNE for improved visualization of single-cell RNA-seq data

Linderman, George C., Rachh, Manas, Hoskins, Jeremy G., Steinerberger, Stefan, Kluger, Yuval

Journal:

Year:

2019

File:

PDF, 3.22 MB

2019

21

Multi-Omics Investigation of Innate Navitoclax Resistance in Triple-Negative Breast Cancer Cells

Marczyk, Michal, Patwardhan, Gauri A., Zhao, Jun, Qu, Rihao, Li, Xiaotong, Wali, Vikram B., Gupta, Abhishek K., Pillai, Manoj M., Kluger, Yuval, Yan, Qin, Hatzis, Christos, Pusztai, Lajos, Gunasekhara

Journal:

Year:

2020

File:

PDF, 3.06 MB

2020

22

Integrative Analysis of Epigenetic Modulation in Melanoma Cell Response to Decitabine: Clinical Implications

Halaban, Ruth, Krauthammer, Michael, Pelizzola, Mattia, Cheng, Elaine, Kovacs, Daniela, Sznol, Mario, Ariyan, Stephan, Narayan, Deepak, Bacchiocchi, Antonella, Molinaro, Annette, Kluger, Yuval, Deng,

Journal:

Year:

2009

Language:

english

File:

PDF, 1.85 MB

english, 2009

23

A Non-canonical BCOR-PRC1.1 Complex Represses Differentiation Programs in Human ESCs

Wang, Zheng, Gearhart, Micah D., Lee, Yu-Wei, Kumar, Ishan, Ramazanov, Bulat, Zhang, Yan, Hernandez, Charles, Lu, Alice Y., Neuenkirchen, Nils, Deng, Jingjing, Jin, Jiaqi, Kluger, Yuval, Neubert, Thom

Journal:

Year:

2018

Language:

english

File:

PDF, 13.79 MB

english, 2018

24

Detecting copy number status and uncovering subclonal markers in heterogeneous tumor biopsies

Fabio Parisi, Stephan Ariyan, Deepak Narayan, Antonella Bacchiocchi, Kathleen Hoyt, Elaine Cheng, Fang Xu, Peining Li, Ruth Halaban, Yuval Kluger

Journal:

Year:

2011

Language:

english

File:

PDF, 1.86 MB

english, 2011

25

Semiquantum chaos and the large N expansion

Fred Cooper, John Dawson, Salman Habib, Yuval Kluger, Dawn Meredith, Harvey Shepard

Journal:

Physica D: Nonlinear Phenomena

Year:

1995

Language:

english

File:

PDF, 1.02 MB

english, 1995

26

Inter- and intra-combinatorial regulation by transcription factors and microRNAs

Yiming Zhou, John Ferguson, Joseph T Chang, Yuval Kluger

Journal:

Year:

2007

Language:

english

File:

PDF, 951 KB

english, 2007

27

Preanalytical variables and phosphoepitope expression in FFPE tissue: quantitative epitope assessment after variable cold ischemic time

Vassilakopoulou, Maria, Parisi, Fabio, Siddiqui, Summar, England, Allison M, Zarella, Elizabeth R, Anagnostou, Valsamo, Kluger, Yuval, Hicks, David G, Rimm, David L, Neumeister, Veronique M

Journal:

Laboratory Investigation

Year:

2015

Language:

english

File:

PDF, 1.25 MB

english, 2015

28

[IEEE 2006 International Conference of the IEEE Engineering in Medicine and Biology Society - New York, NY, USA (2006.08.30-2006.09.3)] 2006 International Conference of the IEEE Engineering in Medicine and Biology Society - Association between pathways in regulatory networks

Kluger, Yuval, Kluger, Harriet, Tuck, David

Year:

2006

Language:

english

File:

PDF, 293 KB

english, 2006

29

PD-L1 Studies Across Tumor Types, its Differential Expression and Predictive Value in Patients Treated with Immune Checkpoint Inhibitors

Kluger, Harriet M, Zito, Christopher R., Turcu, Gabriela, Baine, Marina, Zhang, Hongyi, Adeniran, Adebowale, Sznol, Mario, Rimm, David L., Kluger, Yuval, Chen, Lieping, Cohen, Justine V, Jilaveanu, Lu

Journal:

Clinical Cancer Research

Year:

2017

Language:

english

File:

PDF, 12.13 MB

english, 2017

30

Distinct modes of mitochondrial metabolism uncouple T cell differentiation and function

Bailis, Will, Shyer, Justin A., Zhao, Jun, Canaveras, Juan Carlos Garcia, Al Khazal, Fatimah J., Qu, Rihao, Steach, Holly R., Bielecki, Piotr, Khan, Omair, Jackson, Ruaidhri, Kluger, Yuval, Maher, Lou

Journal:

Year:

2019

Language:

english

File:

PDF, 8.19 MB

english, 2019

31

A panorama of lineage-specific transcription in hematopoiesis

Yuval Kluger, Zheng Lian, Xueqing Zhang, Peter E. Newburger, Sherman M. Weissman

Journal:

Year:

2004

Language:

english

File:

PDF, 302 KB

english, 2004

32

Unraveling condition specific gene transcriptional regulatory networks inSaccharomyces cerevisiae

Hyunsoo Kim, William Hu, Yuval Kluger

Journal:

BMC Bioinformatics

Year:

2006

Language:

english

File:

PDF, 461 KB

english, 2006

33

A Common Set of Gene Regulatory Networks Links Metabolism and Growth Inhibition

Hugh Cam, Egle Balciunaite, Alexandre Blais, Alexander Spektor, Richard C. Scarpulla, Richard Young, Yuval Kluger, Brian David Dynlacht

Journal:

Year:

2004

Language:

english

File:

PDF, 722 KB

english, 2004

34

PCGF Homologs, CBX Proteins, and RYBP Define Functionally Distinct PRC1 Family Complexes

Zhonghua Gao, Jin Zhang, Roberto Bonasio, Francesco Strino, Ayana Sawai, Fabio Parisi, Yuval Kluger, Danny Reinberg

Journal:

Year:

2012

Language:

english

File:

PDF, 1.93 MB

english, 2012

35

A Molecular Chipper technology for CRISPR sgRNA library generation and functional mapping of noncoding regions

Cheng, Jijun, Roden, Christine A., Pan, Wen, Zhu, Shu, Baccei, Anna, Pan, Xinghua, Jiang, Tingting, Kluger, Yuval, Weissman, Sherman M., Guo, Shangqin, Flavell, Richard A., Ding, Ye, Lu, Jun

Journal:

Nature Communications

Year:

2016

Language:

english

File:

PDF, 1005 KB

english, 2016

36

Randomized near-neighbor graphs, giant components and applications in data science

Jaffe, Ariel, Kluger, Yuval, Linderman, George C., Mishne, Gal, Steinerberger, Stefan

Journal:

Journal of Applied Probability

Year:

2020

File:

PDF, 2.86 MB

2020

37

XBP1 Controls Diverse Cell Type- and Condition-Specific Transcriptional Regulatory Networks

Diego Acosta-Alvear, Yiming Zhou, Alexandre Blais, Mary Tsikitis, Nathan H. Lents, Carolina Arias, Christen J. Lennon, Yuval Kluger, Brian David Dynlacht

Journal:

Year:

2007

Language:

english

File:

PDF, 2.27 MB

english, 2007

38

Active and Inactive Enhancers Cooperate to Exert Localized and Long-Range Control of Gene Regulation

Proudhon, Charlotte, Snetkova, Valentina, Raviram, Ramya, Lobry, Camille, Badri, Sana, Jiang, Tingting, Hao, Bingtao, Trimarchi, Thomas, Kluger, Yuval, Aifantis, Iannis, Bonneau, Richard, Skok, Jane A

Journal:

Year:

2016

Language:

english

File:

PDF, 2.54 MB

english, 2016

39

RUNX Transcription Factor-Mediated Association of Cd4 and Cd8 Enables Coordinate Gene Regulation

Amélie Collins, Susannah L. Hewitt, Julie Chaumeil, MacLean Sellars, Mariann Micsinai, Jeanne Allinne, Fabio Parisi, Elphège P. Nora, Dan J. Bolland, Anne E. Corcoran, Yuval Kluger, Remy Bosselut, Wil

Journal:

Year:

2011

Language:

english

File:

PDF, 1.26 MB

english, 2011

40

cDNA microarray analysis of invasive and tumorigenic phenotypes in a breast cancer model

Kluger, Harriet M, Kluger, Yuval, Gilmore-Hebert, Maureen, DiVito, Kyle, Chang, Joseph T, Rodov, Sofya, Mironenko, Olga, Kacinski, Barry M, Perkins, Archibald S, Sapi, Eva

Journal:

Laboratory Investigation

Year:

2004

Language:

english

File:

PDF, 204 KB

english, 2004

41

Dileptons from disoriented chiral condensates

Kluger, Yuval, Koch, Volker, Randrup, Jørgen, Wang, Xin-Nian

Journal:

Physical Review C

Year:

1998

Language:

english

File:

PDF, 267 KB

english, 1998

42

Characterizing disease states from topological properties of transcriptional regulatory networks

David P Tuck, Harriet M Kluger, Yuval Kluger

Journal:

BMC Bioinformatics

Year:

2006

Language:

english

File:

PDF, 481 KB

english, 2006

43

The RAG2 C-terminus and ATM protect genome integrity by controlling antigen receptor gene cleavage

Chaumeil, Julie, Micsinai, Mariann, Ntziachristos, Panagiotis, Roth, David B., Aifantis, Iannis, Kluger, Yuval, Deriano, Ludovic, Skok, Jane A.

Journal:

Nature Communications

Year:

2013

Language:

english

File:

PDF, 909 KB

english, 2013

44

Statistical measures of transcriptional diversity capture genomic heterogeneity of cancer

Jiang, Tingting, Shi, Weiwei, Natowicz, René, Ononye, Sophia N, Wali, Vikram B, Kluger, Yuval, Pusztai, Lajos, Hatzis, Christos

Journal:

Year:

2014

Language:

english

File:

PDF, 1.39 MB

english, 2014

45

Gating Mass Cytometry Data by Deep Learning

Li, Huamin, Shaham, Uri, Stanton, Kelly P., Yao, Yi, Montgomery, Ruth, Kluger, Yuval

Journal:

Year:

2017

Language:

english

File:

PDF, 2.31 MB

english, 2017

46

Genomic Heterogeneity and the Small Renal Mass

Ueno, Daiki, Xie, Zuoquan, Boeke, Marta, Syed, Jamil, Nguyen, Kevin A, McGillivray, Patrick, Adeniran, Adebowale, Humphrey, Peter A, Dancik, Garrett M., Kluger, Yuval, Liu, Zongzhi, Kluger, Harriet M,

Journal:

Clinical Cancer Research

Year:

2018

Language:

english

File:

PDF, 1.40 MB

english, 2018

47

Dissipation and Decoherence in Mean Field Theory

Habib, Salman, Kluger, Yuval, Mottola, Emil, Paz, Juan Pablo

Journal:

Physical Review Letters

Year:

1996

Language:

english

File:

PDF, 154 KB

english, 1996

48

10.1038/82823

Edwards, Aled M., Arrowsmith, Cheryl H., Christendat, Dinesh, Yee, Adelinda, Dharamsi, Akil, Kluger, Yuval, Savchenko, Alexei, Cort, John R., Booth, Valerie, Mackereth, Cameron D., Saridakis, Vivian,

Journal:

Natural Structural Biology

Year:

2000

Language:

english

File:

PDF, 473 KB

english, 2000

49

[IEEE Conference Proceedings. Annual International Conference of the IEEE Engineering in Medicine and Biology Society - New York, NY (2006.08.30-2006.09.3)] 2006 International Conference of the IEEE Engineering in Medicine and Biology Society - Association between pathways in regulatory networks

Kluger, Yuval, Kluger, Harriet, Tuck, David

Year:

2006

Language:

english

File:

PDF, 293 KB

english, 2006

50

Germline variant burden in cancer genes correlates with age at diagnosis and somatic mutation burden

Qing, Tao, Mohsen, Hussein, Marczyk, Michal, Ye, Yixuan, OâMeara, Tess, Zhao, Hongyu, Townsend, Jeffrey P., Gerstein, Mark, Hatzis, Christos, Kluger, Yuval, Pusztai, Lajos

Journal:

Nature Communications

Year:

2020

File:

PDF, 764 KB

2020

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